R4R: Reproducible Data Analyses for All
The project aims to develop R4R, a user-friendly tool for non-programmer scientists to create affordable, reproducible research environments using dynamic program analysis and Docker technology.
Projectdetails
Introduction
Unevaluated science is not worth funding. Gone are the days where a scientific breakthrough could be based on scribbles made on a few loose sheets of paper reviewed by a single attentive reader. Most disciplines rely on experimental data that is collected, analyzed, and presented using powerful computational tools. The scientific adventure hinges on our ability to openly and widely share and reproduce such results.
Project Goal
The goal of this PoC is to market a tool, R4R, for non-programmer scientists to make their archival work easily reproducible and offer it to them through a non-expensive licence. Affordable reproducibility is key to independent evaluation of previously published results.
Focus Areas
We will focus on reproducibility of data analysis pipelines written in R with RMarkdown or Jupyter. Creating a reproducible environment is hard, labor-intensive, and error-prone, and requires expertise that data analysts lack.
Proposed Solution
We propose to use dynamic program analysis techniques to track dependencies, data inputs, and other sources of non-determinism needed for reproducibility. R4R will synthesize metadata to generate self-contained, portable, fully reproducible environments, based on Docker images.
Financiële details & Tijdlijn
Financiële details
Subsidiebedrag | € 150.000 |
Totale projectbegroting | € 150.000 |
Tijdlijn
Startdatum | 1-1-2024 |
Einddatum | 30-6-2025 |
Subsidiejaar | 2024 |
Partners & Locaties
Projectpartners
- CESKE VYSOKE UCENI TECHNICKE V PRAZEpenvoerder
Land(en)
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Realizing the benefits of safety-security co-analysis through effective tool support
RUBICON aims to develop a proof-of-concept software tool for integrated safety-security risk analysis in technology, enhancing decision-making through advanced algorithms and multi-objective optimization.
Scalable Learning for Reproducibility in High-Dimensional Biomedical Signal Processing: A Robust Data Science Framework
ScReeningData aims to develop a scalable learning framework to enhance statistical robustness and reproducibility in high-dimensional data analysis, reducing false positives across scientific domains.
Tool for the Analysis of Information Transfer in Manuscript Cultures
The TInTraMac project develops a free, flexible research tool to encourage scholars to adopt digital methods for analyzing manuscript texts, enhancing accessibility and collaboration in textual studies.
Chemical Tools for Transcriptome-wide Analysis and Modulation of RNA
The RiboChem program aims to develop innovative chemical tools to explore RNA functions and riboswitches, enhancing understanding and targeting for antibiotic development.
Resilient and Sustainable Software Security
The RS³ project aims to enhance software security by developing resilient and sustainable countermeasures through innovative testing, secure compilers, attack mitigation, and hardware improvements.
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